You have to make the plot yourself, but the basic data is easily available in ATK, via the ElectronDensity and EffectivePotential. You can extract this to a Cube file, or make the plane-averaging directly in Python with ATK, sort of like
config = nlread("file.nc",DeviceConfiguration)[0]
density = ElectronDensity(config)
z_axis_length = density.unitCell()[2][2].inUnitsOf(Angstrom)
Nz = density.shape()[2]
# Loop over all the data and calculate the average in the xy-plane
print "Pos (Ang)\tAveraged electron density (%s)" % density.unit()
for i in range(Nz):
print i*z_axis_length/float(Nz),"\t",numpy.average(density[:,:,i])