Author Topic: No of atoms and simulation-reg  (Read 2070 times)

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Offline GJK

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No of atoms and simulation-reg
« on: March 3, 2014, 18:37 »
Hi all,

From my first basic conversations with Mr.Anders Blom Its clear that we can run a simulation of 1000 atoms on 1GB memory in a laptop.

In our lab when I shooted the simulation of a device with 4 core processor in one of the four parallel nodes I am getting Buzz error and the work is cut off not completely and running on 2 cores.Kindly help me to recover this problem.

Should I constraint to the number of atoms?

Thanks in advance

Offline Nordland

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Re: No of atoms and simulation-reg
« Reply #1 on: March 3, 2014, 23:19 »
The number of atoms matters for the calculation size, but so does other things, try to play around with the tutorial and see how the performance is of your machine.

Offline Anders Blom

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Re: No of atoms and simulation-reg
« Reply #2 on: March 4, 2014, 13:46 »
The number of atoms is not the relevant measure, really. 1000 Au atoms with DZP basis set is very different from 1000 C atoms with SZP basis set. You can estimate the memory needed for a calculation (there is a mini-tutorial on this), that the first step, and then also if you have problems with memory, make sure not to put more than 1 MPI process / node.

Offline GJK

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Re: No of atoms and simulation-reg
« Reply #3 on: March 4, 2014, 18:43 »
Thank you Mr.Anders.Can u provide me the tutorial link for memory requirements?

Offline Umberto Martinez

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Re: No of atoms and simulation-reg
« Reply #4 on: March 4, 2014, 20:33 »
all the tutorials are listed in the Tutorials section of the website:
http://quantumwise.com/publications/tutorials
mini-, longer, builder tutorials, ecc ecc.. all you may need.
A useful link is also the Manuals page: http://quantumwise.com/manuals


You are looking for the "Estimating the memory usage for a calculation" mini-tutorial.