Another way is to open Coordinate Tools>Coordinate list, in the Builder at least.
But I agree it should be easier, and therefore I made my own plugin for it, which at least works quite nicely in the Builder (I could easily port it to the Viewer also if you find it useful). It's attached, install using AddOn Manager (Local install) and restart VNL to see it in the Builder (it has an "i" icon). Click it and see!
Your feedback is duly noted for future releases. Btw, I didn't quite get what you meant about "you get the list of atoms at the top"?