This change of the space group took place when building a MoS2 monolayer by deleting one of the two monolayers in the bulk MoS2 primitive cell. And this is because bulk MoS2 and a monolayer of MoS2 have different space group symmetries, I suppose. Otherwise, why do you think they should be the same?
You may actually take a look at this paper A. Molina-Sánchez and L. Wirtz
Phys. Rev. B 84, 155413 – Published 11 October 2011, where the space groups of the two materials are mentioned.