Your assumption of the integration window is not entirely correct. Actually you integrate from -infinity to +infinity, but the transmission spectrum is weighted by the composite Fermi distributions of the left and right electrodes (see
http://quantumwise.com/documents/manuals/latest/ReferenceManual/index.html/ref.transmissionspectrum.html). So depending on the electron temperature, the active integration range can extend quite far beyond the bias window; normally you should at least have 5kT extra to be on the safe side.
You can see the "bias window coverage" in the report in the log file from the current calculation. The number is an error estimate for the current; if it's below 100% you have a too narrow integration window.
You do have a point however that using a transmission from -5 to 5 eV is overkill for a bias of up to say 2 V. So if the transmission calculation is the primary bottleneck of the calculation, you can reduce time by making the interval smaller. Just look at that report to make sure it's not too small. Often it's also interesting to see what the spectrum looks like, also outside the bias window - it can give you an idea of how large bias you need to have to see NDR, or something like that.
Also note that the transmission spectrum is almost linearly parallelized, up to hundreds of nodes. So you can easily gain a factor of 10 by running the transmission calculation in parallel MPI on 16 nodes or so.