missing bonds after optimization

[Anurag Chaudhury]

After optimizing a Phosphorene sheet doped with a Sulphur atom, the bond between the S atom and adjacent P atom vanished, although the bond length between them is in accordance with previous reported results. Keeping the bond length same, can the bond be made to reappear? What is the criterion which ATK applies to show a bond between 2 atoms? 

[Petr Khomyakov]

In the Builder, you may select Graphics->Properties->Atoms, and then increase Fuzz factor until you see "missing bonds" in your structure.

[Anders Blom]

http://quantumwise.com/component/fsj_faqs/faq/846-bonds-between-some-atoms-are-missing?Itemid=101

[Anurag Chaudhury]

Thanks a lot.