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Author Topic: VNL with GROMACS  (Read 3318 times)

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Offline Raj

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VNL with GROMACS
« on: February 14, 2017, 01:51 »
I am using GROMACS to run molecular dynamics simulations. In one of my simulations, I need to create a tethered FCC lattice surface. I am trying to use VNL to create the surface. But I am unable to import the .cif file into GROMACS. How can I do that? GROMACS supports .pdb files which is similar to the .cif file format.
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Offline Ulrik G. Vej-Hansen

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Re: VNL with GROMACS
« Reply #1 on: February 14, 2017, 09:09 »
If you provide the .cif file, we can check if something should be wrong with it, but otherwise, it is really a question for GROMACS support. The .cif format  is a widely used file-format.
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Offline Anders Blom

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Re: VNL with GROMACS
« Reply #2 on: February 14, 2017, 20:07 »
PDB is not really similar to CIF...
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