Author Topic: Penta-graphene nanoribbon  (Read 3280 times)

0 Members and 1 Guest are viewing this topic.

Offline Trung Phuc

  • Regular QuantumATK user
  • **
  • Posts: 10
  • Country: vn
  • Reputation: 0
    • View Profile
Penta-graphene nanoribbon
« on: October 12, 2017, 17:36 »
Hello administrators!
I am a new user of quantumwise. After reviewing your previous posts about how to create penta-graphene. I tried to make penta-graphene ribbon like this paper (attached below). Personally, I think my outcome (attached below) looks not bad. However, I had 2 problems:
+ Could not passivate one carbon atom with one hydrogen atom.
+ Could not repeat this unit cell to obtain a penta-graphene ribbon.
Thank you so much for your attention!
« Last Edit: October 12, 2017, 17:38 by Trung Phuc »

Offline Jess Wellendorff

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 933
  • Country: dk
  • Reputation: 29
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #1 on: October 13, 2017, 11:34 »
Dear Trung Punc,
please attach also the ATK Python script with the structure you have built. Makes it easier to help you...
- Jess

Offline Trung Phuc

  • Regular QuantumATK user
  • **
  • Posts: 10
  • Country: vn
  • Reputation: 0
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #2 on: October 13, 2017, 18:08 »
Hi Jess!
Thank you for your suggestion. Here is my structure. I tried to color it to make it easier to see but the color disappeared after saving.
I  look forward to see your advice.

Offline Jess Wellendorff

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 933
  • Country: dk
  • Reputation: 29
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #3 on: October 18, 2017, 10:52 »
1) You should use the recipe on https://quantumwise.com/forum/index.php?topic=5329.msg23011#msg23011 to first create penta-graphene, then remove the appropriate C atoms  to create ribbon without repeating the cell.
2) Use the Coordinate Tools --> Custom Passivator with SP2 hybridization to passivate with only 1 H atom.

Offline Jess Wellendorff

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 933
  • Country: dk
  • Reputation: 29
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #4 on: October 18, 2017, 11:26 »
You should probably also swap a few axes to align the ribbon along C.

Offline Trung Phuc

  • Regular QuantumATK user
  • **
  • Posts: 10
  • Country: vn
  • Reputation: 0
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #5 on: October 18, 2017, 16:50 »
Thank you so much, Jess!
Your advice is very helpful to me. In addition, your other answers in this forum are so great. Keep doing your job well. I will practice more and more.
You spent a lot of time helping me. Hope you be healthy and happy.
All the bests,
Phuc

Offline Jess Wellendorff

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 933
  • Country: dk
  • Reputation: 29
    • View Profile
Re: Penta-graphene nanoribbon
« Reply #6 on: October 25, 2017, 14:47 »
Thanks very much!