Author Topic: OverflowError: (34, 'Numerical result out of range')  (Read 9986 times)

0 Members and 1 Guest are viewing this topic.

Offline dong0216

  • Regular QuantumATK user
  • **
  • Posts: 23
  • Country: cn
  • Reputation: 0
    • View Profile
OverflowError: (34, 'Numerical result out of range')
« on: November 14, 2018, 04:36 »
This error occurred when I used DFT-1/2 to calculate the transmission spectrum. I don't know how to solve it. Looking forward to your reply. Thank you.
OverflowError: OverflowError: (34, 'Numerical result out of range')
(34, 'Numerical result out of range')
  File "zipdir/NL/Calculators/DensityFunctionalTheory/LCAOCalculator/DFTHalfUtilities.py", line 353, in calculateSelfEnergyPotential
  File "zipdir/NL/Calculators/DensityFunctionalTheory/LCAOCalculator/DFTHalfUtilities.py", line 353, in calculateSelfEnergyPotential
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 2

Offline Ulrik G. Vej-Hansen

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 425
  • Country: dk
  • Reputation: 8
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #1 on: November 14, 2018, 09:29 »
Please provide the script that gives the error, and preferably also the full log-file.

Offline dong0216

  • Regular QuantumATK user
  • **
  • Posts: 23
  • Country: cn
  • Reputation: 0
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #2 on: November 14, 2018, 13:21 »
Thanks for your reply.  These are my files.

Offline Ulrik G. Vej-Hansen

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 425
  • Country: dk
  • Reputation: 8
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #3 on: November 14, 2018, 14:46 »
I think it is a memory issue. It is a quite large calculation to run on only 8 cores. To troubleshoot I suggest that you:

1. Try with regular PBE.
2. Construct a much smaller model system and try the same calculation.

Offline dong0216

  • Regular QuantumATK user
  • **
  • Posts: 23
  • Country: cn
  • Reputation: 0
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #4 on: November 15, 2018, 08:52 »
Thanks for your reply. I will try the method you provide. Since the system needs to take into account weak intermolecular interactions and needs to use semiempirical functional, I used DFT-1/2.

Offline Ulrik G. Vej-Hansen

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 425
  • Country: dk
  • Reputation: 8
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #5 on: November 15, 2018, 11:12 »
GGA-1/2 uses about the same memory as regular GGA, so I don't think it is the cause of the issue, but it would be good to check it.

Offline Petr Khomyakov

  • QuantumATK Staff
  • Supreme QuantumATK Wizard
  • *****
  • Posts: 1290
  • Country: dk
  • Reputation: 25
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #6 on: November 15, 2018, 11:37 »
Since the system needs to take into account weak intermolecular interactions and needs to use semiempirical functional, I used DFT-1/2.

What do you exactly mean by "weak intermolecular interactions"?

Offline dong0216

  • Regular QuantumATK user
  • **
  • Posts: 23
  • Country: cn
  • Reputation: 0
    • View Profile
Re: OverflowError: (34, 'Numerical result out of range')
« Reply #7 on: November 19, 2018, 09:31 »
Thank you very much for your reply. The weak intermolecular interactions refers to weak interaction between aromatic rings.Thanks .