Author Topic: What does error exit code 11 mean?  (Read 118 times)

0 Members and 1 Guest are viewing this topic.

Offline Alireza

  • Regular ATK user
  • **
  • Posts: 11
  • Country: de
  • Reputation: 0
    • View Profile
What does error exit code 11 mean?
« on: December 15, 2021, 14:23 »
Dear Experts, I got this error message during my electronic transport calculation.
Code
===================================================================================
=   BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
=   PID 1017659 RUNNING AT taurussmp8
=   EXIT CODE: 11
=   CLEANING UP REMAINING PROCESSES
=   YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
===================================================================================
   Intel(R) MPI Library troubleshooting guide:
      https://software.intel.com/node/561764
===================================================================================
The man signal states
Code
SIGSEGV      11       Core    Invalid memory reference
which means that the program tries to access memory which does not belong to my user space, I guess. Please kindly file my input and output files. The slurm setting is as follows
Code
#!/bin/bash
#SBATCH -J "04.3821"                   
#SBATCH -A 'nano-10'		              
#SBATCH --time=48:58:00                     
#SBATCH --nodes=1
#SBATCH --ntasks=150
#SBATCH --cpus-per-task=1
#SBATCH --mem=20000000 	
#SBATCH --output=%x.log                       
#SBATCH --error=%x.err                         
#SBATCH --partition=julia                 
#SBATCH --mail-type=end
#SBATCH --mail-user=alireza.ghasemifard@tu-dresden.de

### prepare calculation
# set the name of your Python file
PYTHON_NAME="Device3821.py"
# specify licence file
export SNPSLMD_LICENSE_FILE="2722@141.30.9.17"
# create a temporary log file to view job in real time
export TEMP_LOG_PATH="temp.log"


### submit calculation
# set number of CPUs per process of QuantumATK to number of CPUs per task
export OMP_NUM_THREADS=$SLURM_CPUS_PER_TASK
export MKL_NUM_THREADS=$SLURM_CPUS_PER_TASK
# run the calculation
/projects/m_chemie/Quantumatk/2021.06/libexec/mpiexec.hydra -n $SLURM_NTASKS /projects/m_chemie/Quantumatk/2021.06/bin/atkpython $PYTHON_NAME